Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim35Q8C006 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim35Q8C006 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm12842-201ENSMUST00000117298 476 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm3810-201ENSMUST00000122413 476 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm26091-201ENSMUST00000122704 82 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 n-R5s150-201ENSMUST00000122705 108 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm25966-201ENSMUST00000157169 117 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm25283-201ENSMUST00000157272 77 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm24747-201ENSMUST00000157835 87 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm22611-201ENSMUST00000158288 150 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm16102-201ENSMUST00000160955 420 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm21850-201ENSMUST00000179792 359 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm27152-201ENSMUST00000183828 99 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm37966-201ENSMUST00000193122 326 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm45543-201ENSMUST00000209327 88 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm45626-201ENSMUST00000210093 361 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm25139-201ENSMUST00000083247 210 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim35Q8C006 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim35Q8C006 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim35Q8C006 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm38152-201ENSMUST00000195389 3566 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.49□□□□□ -1.37
Trim35Q8C006 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm26340-201ENSMUST00000102365 99 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm22267-201ENSMUST00000104008 131 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm23641-201ENSMUST00000157857 101 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm24726-201ENSMUST00000158232 121 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Mir6338-201ENSMUST00000183389 109 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm27507-201ENSMUST00000184199 93 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm28023-201ENSMUST00000184556 60 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm27825-201ENSMUST00000184586 60 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm38270-201ENSMUST00000192721 407 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm7726-201ENSMUST00000206241 231 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 CT010511.1-201ENSMUST00000224570 315 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm5321-201ENSMUST00000072050 447 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm26175-201ENSMUST00000083794 131 ntBASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim35Q8C006 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim35Q8C006 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Trim35Q8C006 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.47□□□□□ -1.37
Trim35Q8C006 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm43508-201ENSMUST00000197251 3783 ntBASIC6.47□□□□□ -1.37
Trim35Q8C006 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Trim35Q8C006 Mir708-201ENSMUST00000102189 109 ntBASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm23768-201ENSMUST00000104440 131 ntBASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm14614-201ENSMUST00000119873 384 ntBASIC6.47□□□□□ -1.37
Trim35Q8C006 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm23956-201ENSMUST00000157211 119 ntBASIC6.47□□□□□ -1.37
Trim35Q8C006 Gm23601-201ENSMUST00000157259 131 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms