Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.24□□□□□ -1.89
Col16a1Q8BLX7 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Gm13743-201ENSMUST00000121486 724 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Mir8116-201ENSMUST00000184134 97 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Mir6363-201ENSMUST00000184880 114 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Gm43587-201ENSMUST00000199590 204 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.23□□□□□ -1.89
Col16a1Q8BLX7 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm13439-201ENSMUST00000117541 409 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm11285-201ENSMUST00000118443 322 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm15195-201ENSMUST00000118775 263 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm22257-201ENSMUST00000158687 301 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm16232-201ENSMUST00000162856 167 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm19257-201ENSMUST00000186121 183 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 AC131100.2-201ENSMUST00000227701 998 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col16a1Q8BLX7 Gm12941-201ENSMUST00000117934 220 ntBASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Mir6997-201ENSMUST00000184313 71 ntBASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Gm27330-201ENSMUST00000184689 132 ntBASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Gm19418-201ENSMUST00000197436 580 ntBASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Col16a1Q8BLX7 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Gm23670-201ENSMUST00000157469 119 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Gm38332-201ENSMUST00000194189 147 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Gm6615-201ENSMUST00000199426 631 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Gm45150-201ENSMUST00000206051 467 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Gm17890-201ENSMUST00000221419 757 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.21□□□□□ -1.9
Col16a1Q8BLX7 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm24671-201ENSMUST00000104159 158 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm13868-201ENSMUST00000122411 294 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm16533-201ENSMUST00000140035 228 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm25902-201ENSMUST00000158493 318 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm23179-201ENSMUST00000158693 304 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm22192-201ENSMUST00000175128 85 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm25632-201ENSMUST00000083112 85 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.2□□□□□ -1.9
Col16a1Q8BLX7 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Gm13314-201ENSMUST00000118742 335 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Gm24177-201ENSMUST00000158927 131 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Gm5268-201ENSMUST00000189212 940 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Gm23677-201ENSMUST00000083156 104 ntBASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col16a1Q8BLX7 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Snora36b-201ENSMUST00000104383 132 ntBASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Gm23867-201ENSMUST00000122649 274 ntBASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Gm28923-201ENSMUST00000187755 322 ntBASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Gm45395-201ENSMUST00000209891 559 ntBASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Col16a1Q8BLX7 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms