Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a1Q04857 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a1Q04857 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a1Q04857 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm14591-201ENSMUST00000120407 518 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm23959-201ENSMUST00000157208 324 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm24944-201ENSMUST00000158330 128 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm27883-201ENSMUST00000183941 102 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Mir7658-201ENSMUST00000184043 57 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm27818-201ENSMUST00000184536 159 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm6075-201ENSMUST00000186816 486 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm29479-201ENSMUST00000190352 455 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm3010-201ENSMUST00000198805 448 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm19726-201ENSMUST00000205008 240 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a1Q04857 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a1Q04857 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.21□□□□□ -1.58
Col6a1Q04857 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a1Q04857 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a1Q04857 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a1Q04857 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a1Q04857 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a1Q04857 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a1Q04857 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm13250-201ENSMUST00000117209 753 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm15603-201ENSMUST00000119252 492 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm11742-201ENSMUST00000119903 233 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm23902-201ENSMUST00000157571 134 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Mir3964-201ENSMUST00000174898 74 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm9722-201ENSMUST00000194568 802 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm44779-201ENSMUST00000206937 708 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a1Q04857 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.2□□□□□ -1.58
Col6a1Q04857 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a1Q04857 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm11830-201ENSMUST00000120175 561 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm13867-201ENSMUST00000120844 395 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm16358-201ENSMUST00000146046 210 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm24240-201ENSMUST00000157785 135 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm23078-201ENSMUST00000157848 148 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm16318-201ENSMUST00000162402 601 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm29334-201ENSMUST00000190334 357 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm43214-201ENSMUST00000199242 352 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm43393-201ENSMUST00000200147 194 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm44348-201ENSMUST00000200165 122 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm45434-201ENSMUST00000210550 293 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm18854-201ENSMUST00000211196 329 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.19□□□□□ -1.58
Col6a1Q04857 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms