Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm45434-201ENSMUST00000210550 293 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm45313-201ENSMUST00000210584 178 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm5955-201ENSMUST00000222712 219 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm23460-201ENSMUST00000083258 109 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col8a1Q00780 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.14□□□□□ -1.75
Col8a1Q00780 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm24792-201ENSMUST00000104286 128 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm15603-201ENSMUST00000119252 492 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm11931-201ENSMUST00000121630 447 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm22037-201ENSMUST00000157280 296 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm26350-201ENSMUST00000157531 288 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm24780-201ENSMUST00000157635 143 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm22381-201ENSMUST00000158186 107 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Mir5710-201ENSMUST00000176884 69 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm5777-201ENSMUST00000177265 448 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm24518-201ENSMUST00000180275 94 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm18177-201ENSMUST00000188373 404 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm37659-201ENSMUST00000194574 111 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Mir6516-201ENSMUST00000196236 110 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm42579-201ENSMUST00000200512 734 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm42458-201ENSMUST00000201914 369 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm44059-201ENSMUST00000204048 351 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm45007-201ENSMUST00000206237 366 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm44648-201ENSMUST00000208267 329 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col8a1Q00780 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Snord59a-201ENSMUST00000082844 74 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm25482-201ENSMUST00000083225 107 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm22740-201ENSMUST00000083439 109 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col8a1Q00780 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col8a1Q00780 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.13□□□□□ -1.75
Col8a1Q00780 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col8a1Q00780 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm11874-201ENSMUST00000117437 130 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm14067-201ENSMUST00000119340 314 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm7953-201ENSMUST00000168278 469 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm24819-201ENSMUST00000175094 166 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21842-201ENSMUST00000177552 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21626-201ENSMUST00000177791 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21562-201ENSMUST00000177888 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21539-201ENSMUST00000177925 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21599-201ENSMUST00000178249 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21914-201ENSMUST00000178452 498 ntBASIC4.12□□□□□ -1.75
Col8a1Q00780 Gm21723-201ENSMUST00000178692 498 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms