Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14957-201ENSMUST00000121069 817 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm14159-201ENSMUST00000119832 451 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm12607-201ENSMUST00000120724 493 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm24675-201ENSMUST00000158757 259 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm8151-201ENSMUST00000184817 871 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm36298-201ENSMUST00000223394 1732 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm22228-201ENSMUST00000157364 101 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm29556-201ENSMUST00000187591 696 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm26458-201ENSMUST00000082832 128 ntBASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col6a3E9PWQ3 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 AC135669.2-201ENSMUST00000215636 4958 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm24010-201ENSMUST00000157731 282 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm18486-201ENSMUST00000184040 298 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm28975-201ENSMUST00000186412 686 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm23716-201ENSMUST00000157348 144 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm27786-201ENSMUST00000184337 70 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm1833-201ENSMUST00000191608 682 ntBASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col6a3E9PWQ3 Gm45483-201ENSMUST00000209845 1682 ntBASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Gm23824-201ENSMUST00000158741 276 ntBASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Snora31-201ENSMUST00000083213 130 ntBASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Gm17186-201ENSMUST00000171742 456 ntBASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Col6a3E9PWQ3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm44220-201ENSMUST00000203784 2487 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm4057-201ENSMUST00000221407 368 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm44887-201ENSMUST00000208980 178 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Gm26449-201ENSMUST00000082452 104 ntBASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col6a3E9PWQ3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Gm14897-201ENSMUST00000118213 207 ntBASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Gm6797-201ENSMUST00000119440 512 ntBASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 AC153932.1-201ENSMUST00000218558 787 ntBASIC2.4□□□□□ -2.02
Col6a3E9PWQ3 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms