Protein–RNA interactions for Protein: Q9Z238

Ccne2, G1/S-specific cyclin-E2, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne2Q9Z238 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Actl10-202ENSMUST00000226583 1501 ntBASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Rarb-207ENSMUST00000225921 2756 ntBASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne2Q9Z238 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne2Q9Z238 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccne2Q9Z238 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccne2Q9Z238 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccne2Q9Z238 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccne2Q9Z238 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne2Q9Z238 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Gm27389-201ENSMUST00000183622 195 ntBASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Gm21362-201ENSMUST00000194272 928 ntBASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne2Q9Z238 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm18958-201ENSMUST00000174258 762 ntBASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm27000-201ENSMUST00000182943 842 ntBASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne2Q9Z238 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne2Q9Z238 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Gm26039-201ENSMUST00000158152 144 ntBASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Gm10819-201ENSMUST00000099988 561 ntBASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne2Q9Z238 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms