Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmg20bQ9Z104 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Timm23-208ENSMUST00000226683 750 ntBASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Hmg20bQ9Z104 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Hmg20bQ9Z104 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Gm715-201ENSMUST00000117865 831 ntBASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Gm12085-201ENSMUST00000119263 940 ntBASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Gm10812-201ENSMUST00000099864 546 ntBASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmg20bQ9Z104 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Gm9731-201ENSMUST00000209480 747 ntBASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmg20bQ9Z104 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Odf3b-204ENSMUST00000227834 930 ntBASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmg20bQ9Z104 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmg20bQ9Z104 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmg20bQ9Z104 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms