Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn9Q9Z0S7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn9Q9Z0S7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Gm15378-201ENSMUST00000121894 207 ntBASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Gm10517-202ENSMUST00000192970 758 ntBASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cldn9Q9Z0S7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cldn9Q9Z0S7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cldn9Q9Z0S7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Cldn9Q9Z0S7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn9Q9Z0S7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cldn9Q9Z0S7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cldn9Q9Z0S7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Gm20760-201ENSMUST00000179197 648 ntBASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.58■□□□□ 0.24
Cldn9Q9Z0S7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn9Q9Z0S7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms