Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.47■□□□□ 0.39
Cldn3Q9Z0G9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn3Q9Z0G9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Gm715-201ENSMUST00000117865 831 ntBASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn3Q9Z0G9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn3Q9Z0G9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Timm23-208ENSMUST00000226683 750 ntBASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn3Q9Z0G9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cldn3Q9Z0G9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms