Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.42□□□□□ -0.26
CcsQ9WU84 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CcsQ9WU84 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.42□□□□□ -0.26
CcsQ9WU84 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CcsQ9WU84 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CcsQ9WU84 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.42□□□□□ -0.26
CcsQ9WU84 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CcsQ9WU84 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CcsQ9WU84 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.41□□□□□ -0.26
CcsQ9WU84 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CcsQ9WU84 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Gm12933-201ENSMUST00000120203 872 ntBASIC13.4□□□□□ -0.26
CcsQ9WU84 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.4□□□□□ -0.26
CcsQ9WU84 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.4□□□□□ -0.26
CcsQ9WU84 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.4□□□□□ -0.26
CcsQ9WU84 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CcsQ9WU84 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.4□□□□□ -0.26
CcsQ9WU84 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CcsQ9WU84 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.39□□□□□ -0.27
CcsQ9WU84 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CcsQ9WU84 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CcsQ9WU84 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.39□□□□□ -0.27
CcsQ9WU84 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Gm7514-201ENSMUST00000209475 934 ntBASIC13.39□□□□□ -0.27
CcsQ9WU84 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.39□□□□□ -0.27
CcsQ9WU84 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CcsQ9WU84 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CcsQ9WU84 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CcsQ9WU84 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms