Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Gm8520-201ENSMUST00000186517 868 ntBASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a2Q9JLR1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Gm5643-201ENSMUST00000117081 966 ntBASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Gm8969-201ENSMUST00000199694 526 ntBASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Gm10138-203ENSMUST00000206952 366 ntBASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a2Q9JLR1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a2Q9JLR1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Mir2861-201ENSMUST00000175539 82 ntBASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sec61a2Q9JLR1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a2Q9JLR1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a2Q9JLR1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sec61a2Q9JLR1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Gm13158-201ENSMUST00000122007 736 ntBASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sec61a2Q9JLR1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sec61a2Q9JLR1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms