Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Herpud1Q9JJK5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Gm4968-201ENSMUST00000071458 858 ntBASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herpud1Q9JJK5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Herpud1Q9JJK5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Gm2559-201ENSMUST00000201323 363 ntBASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Herpud1Q9JJK5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Dio3-201ENSMUST00000097228 1449 ntBASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms