Protein–RNA interactions for Protein: Q9JIT0

Lmbr1, Limb region 1 protein, mousemouse

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmbr1Q9JIT0 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmbr1Q9JIT0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmbr1Q9JIT0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lmbr1Q9JIT0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lmbr1Q9JIT0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmbr1Q9JIT0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Gm18025-201ENSMUST00000221733 862 ntBASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.74■□□□□ 0.75
Lmbr1Q9JIT0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Gm42545-201ENSMUST00000202755 922 ntBASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmbr1Q9JIT0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms