Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps35Q9EQH3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Vps35Q9EQH3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps35Q9EQH3 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.27■□□□□ 0.35
Vps35Q9EQH3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vps35Q9EQH3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps35Q9EQH3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Mir8112-201ENSMUST00000184382 131 ntBASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps35Q9EQH3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.25■□□□□ 0.35
Vps35Q9EQH3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps35Q9EQH3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Mir5122-201ENSMUST00000175004 89 ntBASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Gm10252-201ENSMUST00000209541 832 ntBASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps35Q9EQH3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Timm23-208ENSMUST00000226683 750 ntBASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Vps35Q9EQH3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms