Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm26039-201ENSMUST00000158152 144 ntBASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Cpsf1Q9EPU4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cpsf1Q9EPU4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cpsf1Q9EPU4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Gm11860-201ENSMUST00000122346 1010 ntBASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Gm29518-201ENSMUST00000190858 372 ntBASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cpsf1Q9EPU4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf1Q9EPU4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf1Q9EPU4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf1Q9EPU4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf1Q9EPU4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf1Q9EPU4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cpsf1Q9EPU4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Gm37722-201ENSMUST00000193757 208 ntBASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Cpsf1Q9EPU4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Cpsf1Q9EPU4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cpsf1Q9EPU4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Gm6190-201ENSMUST00000220683 1374 ntBASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Gm7284-201ENSMUST00000131667 944 ntBASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Cpsf1Q9EPU4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms