Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne8Q9DC53 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne8Q9DC53 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18■□□□□ 0.47
Cpne8Q9DC53 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Cpne8Q9DC53 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cpne8Q9DC53 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Cpne8Q9DC53 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cpne8Q9DC53 Gm12382-201ENSMUST00000122005 922 ntBASIC18■□□□□ 0.47
Cpne8Q9DC53 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Gm11841-201ENSMUST00000117060 1963 ntBASIC18■□□□□ 0.47
Cpne8Q9DC53 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne8Q9DC53 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne8Q9DC53 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Gm4974-201ENSMUST00000209974 875 ntBASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne8Q9DC53 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Gm18666-201ENSMUST00000190039 958 ntBASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne8Q9DC53 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne8Q9DC53 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne8Q9DC53 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cpne8Q9DC53 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms