Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ssmem1Q9D9Y8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Gm7638-201ENSMUST00000121348 967 ntBASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Gm43799-201ENSMUST00000201845 579 ntBASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ssmem1Q9D9Y8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssmem1Q9D9Y8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Gm11539-201ENSMUST00000119837 557 ntBASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Gm13436-201ENSMUST00000120418 567 ntBASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Gm13559-201ENSMUST00000120476 863 ntBASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Gm9731-201ENSMUST00000209480 747 ntBASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssmem1Q9D9Y8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Gm6433-201ENSMUST00000118634 875 ntBASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssmem1Q9D9Y8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Gm17661-201ENSMUST00000170317 270 ntBASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssmem1Q9D9Y8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssmem1Q9D9Y8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms