Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3404Q9D506 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm3404Q9D506 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.34■□□□□ 0.53
Gm3404Q9D506 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.34■□□□□ 0.53
Gm3404Q9D506 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3404Q9D506 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3404Q9D506 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3404Q9D506 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Gm3404Q9D506 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3404Q9D506 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Gm3404Q9D506 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Mir6982-201ENSMUST00000184354 68 ntBASIC18.33■□□□□ 0.52
Gm3404Q9D506 Gm37055-201ENSMUST00000191866 133 ntBASIC18.33■□□□□ 0.52
Gm3404Q9D506 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Gm5417-201ENSMUST00000079706 384 ntBASIC18.33■□□□□ 0.52
Gm3404Q9D506 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3404Q9D506 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.32■□□□□ 0.52
Gm3404Q9D506 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3404Q9D506 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.31■□□□□ 0.52
Gm3404Q9D506 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Gm24841-201ENSMUST00000158676 357 ntBASIC18.31■□□□□ 0.52
Gm3404Q9D506 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm3404Q9D506 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.3■□□□□ 0.52
Gm3404Q9D506 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Gm3404Q9D506 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Gm3404Q9D506 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms