Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cfap53Q9D439 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Gm10698-201ENSMUST00000182663 604 ntBASIC18.94■□□□□ 0.62
Cfap53Q9D439 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.94■□□□□ 0.62
Cfap53Q9D439 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.94■□□□□ 0.62
Cfap53Q9D439 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cfap53Q9D439 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Gm4974-201ENSMUST00000209974 875 ntBASIC18.93■□□□□ 0.62
Cfap53Q9D439 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cfap53Q9D439 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cfap53Q9D439 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cfap53Q9D439 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cfap53Q9D439 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Gm10517-202ENSMUST00000192970 758 ntBASIC18.9■□□□□ 0.62
Cfap53Q9D439 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cfap53Q9D439 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cfap53Q9D439 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cfap53Q9D439 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cfap53Q9D439 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.89■□□□□ 0.61
Cfap53Q9D439 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Gm27011-201ENSMUST00000182352 972 ntBASIC18.89■□□□□ 0.61
Cfap53Q9D439 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cfap53Q9D439 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cfap53Q9D439 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms