Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
5530400C23RikQ9D3I0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
5530400C23RikQ9D3I0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
5530400C23RikQ9D3I0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
5530400C23RikQ9D3I0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
5530400C23RikQ9D3I0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms