Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.29■□□□□ 0.2
Chaf1bQ9D0N7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chaf1bQ9D0N7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chaf1bQ9D0N7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1bQ9D0N7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1bQ9D0N7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.25■□□□□ 0.19
Chaf1bQ9D0N7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms