Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lysmd1Q9D0E3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lysmd1Q9D0E3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Gm23547-201ENSMUST00000158210 271 ntBASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lysmd1Q9D0E3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lysmd1Q9D0E3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd1Q9D0E3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Mir7023-201ENSMUST00000185093 64 ntBASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Gm29791-202ENSMUST00000207888 369 ntBASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd1Q9D0E3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lysmd1Q9D0E3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Gm15653-201ENSMUST00000119247 907 ntBASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms