Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Raet1eQ9CZQ6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Raet1eQ9CZQ6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Gm9988-201ENSMUST00000069786 435 ntBASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Gm6139-201ENSMUST00000079261 882 ntBASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Raet1eQ9CZQ6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Raet1eQ9CZQ6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Gm13241-201ENSMUST00000094493 780 ntBASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.16■□□□□ 0.02
Raet1eQ9CZQ6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.15■□□□□ 0.02
Raet1eQ9CZQ6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms