Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm4968-201ENSMUST00000071458 858 ntBASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm43231-201ENSMUST00000202960 2258 ntBASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mrpl55Q9CZ83 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Mrpl55Q9CZ83 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Mrpl55Q9CZ83 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Mrpl55Q9CZ83 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Mrpl55Q9CZ83 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mrpl55Q9CZ83 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mrpl55Q9CZ83 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mrpl55Q9CZ83 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mrpl55Q9CZ83 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mrpl55Q9CZ83 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC11.37□□□□□ -0.59
Mrpl55Q9CZ83 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mrpl55Q9CZ83 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms