Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Gm13216-201ENSMUST00000117145 591 ntBASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Snf8Q9CZ28 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Snf8Q9CZ28 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Snf8Q9CZ28 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.77■□□□□ 0.43
Snf8Q9CZ28 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Snf8Q9CZ28 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Gm26524-201ENSMUST00000192339 390 ntBASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Snf8Q9CZ28 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Gm11927-201ENSMUST00000118472 759 ntBASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Snf8Q9CZ28 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Snf8Q9CZ28 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Snf8Q9CZ28 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms