Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrc40Q9CRC8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc40Q9CRC8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Lrrc40Q9CRC8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lrrc40Q9CRC8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lrrc40Q9CRC8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc40Q9CRC8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Gm10517-202ENSMUST00000192970 758 ntBASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Gm43183-201ENSMUST00000200632 547 ntBASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc40Q9CRC8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc40Q9CRC8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrrc40Q9CRC8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrrc40Q9CRC8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc40Q9CRC8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc40Q9CRC8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrc40Q9CRC8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lrrc40Q9CRC8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms