Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Msantd3Q9CR78 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Ank2-226ENSMUST00000189368 339 ntBASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Msantd3Q9CR78 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Msantd3Q9CR78 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msantd3Q9CR78 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msantd3Q9CR78 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Msantd3Q9CR78 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Gm7284-201ENSMUST00000131667 944 ntBASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Gm7370-201ENSMUST00000219471 767 ntBASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Msantd3Q9CR78 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Msantd3Q9CR78 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msantd3Q9CR78 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msantd3Q9CR78 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msantd3Q9CR78 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msantd3Q9CR78 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msantd3Q9CR78 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Msantd3Q9CR78 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms