Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retreg3Q9CQV4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retreg3Q9CQV4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Gm3375-201ENSMUST00000203929 796 ntBASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retreg3Q9CQV4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Timm23-208ENSMUST00000226683 750 ntBASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retreg3Q9CQV4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Gm43799-201ENSMUST00000201845 579 ntBASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retreg3Q9CQV4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Odf3b-204ENSMUST00000227834 930 ntBASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms