Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm7Q9CQQ8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Gm18101-201ENSMUST00000215769 548 ntBASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm7Q9CQQ8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm7Q9CQQ8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Lsm7Q9CQQ8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Grk6-206ENSMUST00000224995 2971 ntBASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm7Q9CQQ8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.42■□□□□ 0.38
Lsm7Q9CQQ8 Gm22697-201ENSMUST00000175194 63 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms