Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Gm43137-201ENSMUST00000198052 594 ntBASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RTRAFQ9CQE8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Idnk-204ENSMUST00000226010 1898 ntBASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RTRAFQ9CQE8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RTRAFQ9CQE8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RTRAFQ9CQE8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RTRAFQ9CQE8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RTRAFQ9CQE8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTRAFQ9CQE8 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Gm14117-201ENSMUST00000122417 843 ntBASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Rps24-207ENSMUST00000224568 714 ntBASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTRAFQ9CQE8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RTRAFQ9CQE8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms