Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.3■■□□□ 1
Trim34aQ99PP6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34aQ99PP6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 Mir3081-201ENSMUST00000175305 84 ntBASIC21.29■■□□□ 1
Trim34aQ99PP6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Trim34aQ99PP6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34aQ99PP6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Gm27742-201ENSMUST00000184667 60 ntBASIC21.28■■□□□ 1
Trim34aQ99PP6 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.28■■□□□ 1
Trim34aQ99PP6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim34aQ99PP6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim34aQ99PP6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.28■■□□□ 1
Trim34aQ99PP6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34aQ99PP6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim34aQ99PP6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.27■■□□□ 1
Trim34aQ99PP6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim34aQ99PP6 Gm45328-201ENSMUST00000210942 917 ntBASIC21.27■■□□□ 1
Trim34aQ99PP6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34aQ99PP6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
Trim34aQ99PP6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.27■■□□□ 1
Trim34aQ99PP6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim34aQ99PP6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trim34aQ99PP6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Trim34aQ99PP6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim34aQ99PP6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.27■□□□□ 0.99
Trim34aQ99PP6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Gm27357-201ENSMUST00000183754 135 ntBASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.26■□□□□ 0.99
Trim34aQ99PP6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Gm7153-201ENSMUST00000117092 455 ntBASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim34aQ99PP6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim34aQ99PP6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim34aQ99PP6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms