Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Mir2861-201ENSMUST00000175539 82 ntBASIC16.81■□□□□ 0.28
Msh4Q99MT2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.81■□□□□ 0.28
Msh4Q99MT2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh4Q99MT2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.8■□□□□ 0.28
Msh4Q99MT2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.8■□□□□ 0.28
Msh4Q99MT2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Msh4Q99MT2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.79■□□□□ 0.28
Msh4Q99MT2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Msh4Q99MT2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.78■□□□□ 0.28
Msh4Q99MT2 Gm37292-201ENSMUST00000192062 758 ntBASIC16.78■□□□□ 0.28
Msh4Q99MT2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.78■□□□□ 0.28
Msh4Q99MT2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
Msh4Q99MT2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh4Q99MT2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Gm715-201ENSMUST00000117865 831 ntBASIC16.77■□□□□ 0.28
Msh4Q99MT2 Gm12382-201ENSMUST00000122005 922 ntBASIC16.77■□□□□ 0.28
Msh4Q99MT2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.77■□□□□ 0.28
Msh4Q99MT2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh4Q99MT2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Msh4Q99MT2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh4Q99MT2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Msh4Q99MT2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh4Q99MT2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Msh4Q99MT2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.77■□□□□ 0.27
Msh4Q99MT2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh4Q99MT2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Msh4Q99MT2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh4Q99MT2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh4Q99MT2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms