Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.97■□□□□ 0.47
Tpgs1Q99MS8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Gm6433-201ENSMUST00000118634 875 ntBASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tpgs1Q99MS8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Tpgs1Q99MS8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Tpgs1Q99MS8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tpgs1Q99MS8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Tpgs1Q99MS8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Tpgs1Q99MS8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpgs1Q99MS8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tpgs1Q99MS8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms