Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp1b1Q99LU0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp1b1Q99LU0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp1b1Q99LU0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Gm37856-201ENSMUST00000191634 999 ntBASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp1b1Q99LU0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Gm10418-201ENSMUST00000100943 576 ntBASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Gm22240-201ENSMUST00000175225 82 ntBASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Gm29791-202ENSMUST00000207888 369 ntBASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp1b1Q99LU0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Gm13168-201ENSMUST00000121771 632 ntBASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Gm18666-201ENSMUST00000190039 958 ntBASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp1b1Q99LU0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms