Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Birc2-201ENSMUST00000054878 378 ntBASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cstf1Q99LC2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Cstf1Q99LC2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cstf1Q99LC2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 AW822252-206ENSMUST00000208904 237 ntBASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cstf1Q99LC2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cstf1Q99LC2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Gm37722-201ENSMUST00000193757 208 ntBASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cstf1Q99LC2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cstf1Q99LC2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms