Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Gm11539-201ENSMUST00000119837 557 ntBASIC17.14■□□□□ 0.33
Tspan1Q99J59 Gm13436-201ENSMUST00000120418 567 ntBASIC17.14■□□□□ 0.33
Tspan1Q99J59 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Gm2274-201ENSMUST00000184539 609 ntBASIC17.14■□□□□ 0.33
Tspan1Q99J59 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tspan1Q99J59 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.14■□□□□ 0.33
Tspan1Q99J59 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tspan1Q99J59 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.13■□□□□ 0.33
Tspan1Q99J59 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.13■□□□□ 0.33
Tspan1Q99J59 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Gm6433-201ENSMUST00000118634 875 ntBASIC17.12■□□□□ 0.33
Tspan1Q99J59 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Gm43799-201ENSMUST00000201845 579 ntBASIC17.12■□□□□ 0.33
Tspan1Q99J59 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.12■□□□□ 0.33
Tspan1Q99J59 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tspan1Q99J59 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Gm13474-201ENSMUST00000122466 815 ntBASIC17.11■□□□□ 0.33
Tspan1Q99J59 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tspan1Q99J59 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tspan1Q99J59 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms