Protein–RNA interactions for Protein: Q99J21

Mcoln1, Mucolipin-1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcoln1Q99J21 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Mcoln1Q99J21 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Mcoln1Q99J21 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Mcoln1Q99J21 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mcoln1Q99J21 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Mcoln1Q99J21 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mcoln1Q99J21 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Gm23935-201ENSMUST00000102303 57 ntBASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Gm24270-201ENSMUST00000102326 57 ntBASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Gm24245-201ENSMUST00000157318 57 ntBASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.13■□□□□ 0.49
Mcoln1Q99J21 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mcoln1Q99J21 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.12■□□□□ 0.49
Mcoln1Q99J21 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mcoln1Q99J21 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mcoln1Q99J21 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms