Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp1aQ921W0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp1aQ921W0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp1aQ921W0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp1aQ921W0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Chmp1aQ921W0 Haglr-201ENSMUST00000100000 2085 ntBASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Nespas-201ENSMUST00000143738 1083 ntBASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Gm6420-201ENSMUST00000193885 723 ntBASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp1aQ921W0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms