Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb18Q91Y02 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Gm9731-201ENSMUST00000209480 747 ntBASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Pcdhb18Q91Y02 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Gm27741-201ENSMUST00000185060 237 ntBASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Ank2-226ENSMUST00000189368 339 ntBASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb18Q91Y02 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb18Q91Y02 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb18Q91Y02 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb18Q91Y02 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb18Q91Y02 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Gm9103-201ENSMUST00000119371 405 ntBASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Gm7284-201ENSMUST00000131667 944 ntBASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Gm17661-201ENSMUST00000170317 270 ntBASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Mir1668-201ENSMUST00000184114 107 ntBASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb18Q91Y02 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Il3ra-202ENSMUST00000223589 738 ntBASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb18Q91Y02 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.99■□□□□ 0.47
Pcdhb18Q91Y02 Gm5587-201ENSMUST00000206270 674 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms