Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb22Q91XZ8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Pcdhb22Q91XZ8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Pcdhb22Q91XZ8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb22Q91XZ8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb22Q91XZ8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb22Q91XZ8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Mir6982-201ENSMUST00000184354 68 ntBASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb22Q91XZ8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb22Q91XZ8 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb22Q91XZ8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms