Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga11Q91XY8 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Gm37856-201ENSMUST00000191634 999 ntBASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Trmt13-210ENSMUST00000198454 880 ntBASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga11Q91XY8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Gm13168-201ENSMUST00000121771 632 ntBASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga11Q91XY8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Gm11249-201ENSMUST00000117071 859 ntBASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga11Q91XY8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhga11Q91XY8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Gm13401-201ENSMUST00000117074 291 ntBASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Gm13158-201ENSMUST00000122007 736 ntBASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga11Q91XY8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga11Q91XY8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga11Q91XY8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms