Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhga4Q91XY4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhga4Q91XY4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Mir6982-201ENSMUST00000184354 68 ntBASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhga4Q91XY4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhga4Q91XY4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga4Q91XY4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga4Q91XY4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga4Q91XY4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga4Q91XY4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhga4Q91XY4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Timm23-208ENSMUST00000226683 750 ntBASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Odf3b-204ENSMUST00000227834 930 ntBASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhga4Q91XY4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga4Q91XY4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga4Q91XY4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Pcdhga4Q91XY4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms