Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb4Q91XX6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb4Q91XX6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb4Q91XX6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhgb4Q91XX6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Pcdhgb4Q91XX6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb4Q91XX6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Gm10653-202ENSMUST00000139570 835 ntBASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Gm18666-201ENSMUST00000190039 958 ntBASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.26■□□□□ 0.51
Pcdhgb4Q91XX6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Gm12382-201ENSMUST00000122005 922 ntBASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Gm43183-201ENSMUST00000200632 547 ntBASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhgb4Q91XX6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhgb4Q91XX6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms