Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Gm9103-201ENSMUST00000119371 405 ntBASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgb5Q91XX5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgb5Q91XX5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Gm26039-201ENSMUST00000158152 144 ntBASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Gm18958-201ENSMUST00000174258 762 ntBASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb5Q91XX5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Gm27704-201ENSMUST00000185094 107 ntBASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb5Q91XX5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Gm27741-201ENSMUST00000185060 237 ntBASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Ank2-226ENSMUST00000189368 339 ntBASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb5Q91XX5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms