Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.79■□□□□ 0.76
Trex1Q91XB0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trex1Q91XB0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trex1Q91XB0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trex1Q91XB0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trex1Q91XB0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.77■□□□□ 0.76
Trex1Q91XB0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trex1Q91XB0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trex1Q91XB0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trex1Q91XB0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trex1Q91XB0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trex1Q91XB0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trex1Q91XB0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.75■□□□□ 0.75
Trex1Q91XB0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trex1Q91XB0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trex1Q91XB0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Gm18669-201ENSMUST00000216049 778 ntBASIC19.74■□□□□ 0.75
Trex1Q91XB0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.74■□□□□ 0.75
Trex1Q91XB0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trex1Q91XB0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.73■□□□□ 0.75
Trex1Q91XB0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trex1Q91XB0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms