Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx1Q91VR5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx1Q91VR5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Ddx1Q91VR5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx1Q91VR5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx1Q91VR5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx1Q91VR5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Gm12382-201ENSMUST00000122005 922 ntBASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Gm4974-201ENSMUST00000209974 875 ntBASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx1Q91VR5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Odf3b-204ENSMUST00000227834 930 ntBASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx1Q91VR5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx1Q91VR5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.79■□□□□ 0.44
Ddx1Q91VR5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx1Q91VR5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Gm23634-201ENSMUST00000175071 91 ntBASIC17.78■□□□□ 0.44
Ddx1Q91VR5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Gm7889-201ENSMUST00000185591 958 ntBASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Gm33142-201ENSMUST00000193913 867 ntBASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx1Q91VR5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms