Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Gm12085-201ENSMUST00000119263 940 ntBASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.78■□□□□ 0.76
Ddx41Q91VN6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx41Q91VN6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ddx41Q91VN6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx41Q91VN6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Tgds-204ENSMUST00000228543 1594 ntBASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx41Q91VN6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx41Q91VN6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ddx41Q91VN6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Gm38027-201ENSMUST00000192315 235 ntBASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx41Q91VN6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx41Q91VN6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms