Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.06■□□□□ 0.32
Vsx1Q91V10 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.06■□□□□ 0.32
Vsx1Q91V10 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Gm10566-201ENSMUST00000086739 996 ntBASIC17.06■□□□□ 0.32
Vsx1Q91V10 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vsx1Q91V10 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vsx1Q91V10 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.04■□□□□ 0.32
Vsx1Q91V10 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vsx1Q91V10 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.03■□□□□ 0.32
Vsx1Q91V10 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.03■□□□□ 0.32
Vsx1Q91V10 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.03■□□□□ 0.32
Vsx1Q91V10 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vsx1Q91V10 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Gm6623-201ENSMUST00000173570 544 ntBASIC17.02■□□□□ 0.32
Vsx1Q91V10 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Vsx1Q91V10 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vsx1Q91V10 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vsx1Q91V10 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vsx1Q91V10 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms