Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Snrnp25Q8VIK1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Snrnp25Q8VIK1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Snrnp25Q8VIK1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Snrnp25Q8VIK1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Snrnp25Q8VIK1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Gm43799-201ENSMUST00000201845 579 ntBASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.06■□□□□ 0.48
Snrnp25Q8VIK1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Gm13559-201ENSMUST00000120476 863 ntBASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Snrnp25Q8VIK1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms