Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Gm6433-201ENSMUST00000118634 875 ntBASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Gm11643-201ENSMUST00000119578 864 ntBASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.08■□□□□ 0.33
Retreg1dQ8VE91 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg1dQ8VE91 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg1dQ8VE91 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg1dQ8VE91 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg1dQ8VE91 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retreg1dQ8VE91 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg1dQ8VE91 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg1dQ8VE91 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retreg1dQ8VE91 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retreg1dQ8VE91 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Gm11539-201ENSMUST00000119837 557 ntBASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Gm13436-201ENSMUST00000120418 567 ntBASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retreg1dQ8VE91 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retreg1dQ8VE91 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Gm13559-201ENSMUST00000120476 863 ntBASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retreg1dQ8VE91 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms